Publications 2017-2018

Trends in pneumothorax mortality in England (2004–2023): a population-based observational study

Zhong X. et al, (2026), The Lancet Regional Health - Europe, 64, 101632 - 101632

Therapeutic manipulation and spatial quantification of the tumor microenvironment in colorectal cancer

Mulholland-Illingworth EJ. et al, (2026), Iscience, 29

Characterisation of bacteria‐induced colitis and its modulation by probiotics in naked mole rats: a new mammalian model for acute inflammatory disease

Hart DW. et al, (2026), The Journal of Pathology, 268, 493 - 511

Vibrotactile positional therapy for the treatment of positional obstructive sleep apnoea: a multicentre, randomised controlled trial

Kelly JL. et al, (2026), Thorax, 81, 370 - 379

Acute upper gastrointestinal bleeding in the UK: 2022 audit update

Nigam GB. et al, (2026), Gut, 75, 760 - 771

Voices from the frontline: how global funding cuts are reshaping the viral hepatitis response

Delphin M. et al, (2026), The Lancet Gastroenterology & Hepatology, 11, 269 - 271

Toward Integration of Molecular Measures and Artificial Intelligence-Based Assessments With Clinical End Points in Inflammatory Bowel Disease

Reinisch W. et al, (2026), Gastroenterology, 170, 686 - 703

Cochrane Database of Systematic Reviews

(2026)

Identification of transporters essential for survival of Leishmania promastigotes in the digestive tract of sand flies

Sádlová J. et al, (2026), PLOS Pathogens, 22, e1014049 - e1014049

Research without borders: advancing equitable global partnerships to accelerate HBV elimination efforts

Batbold E. et al, (2026), Nature Reviews Gastroenterology & Hepatology

Predicting pyrazinamide resistance in Mycobacterium tuberculosis using a graph convolutional network

Dissanayake D. et al, (2026), BMC Microbiology

Longitudinal Epidemiology and Variant Dynamics of SARS-CoV-2 in Coastal Kenya (2020–2025): Clinical Features and Wave Patterns

Lambisia AW. et al, (2026), Open Forum Infectious Diseases, 13

Vaccine effectiveness of a bivalent respiratory syncytial virus (RSV) pre-F vaccine against RSV-associated hospital admission among adults aged 75–79 years in England: a multicentre, test-negative, case–control study

Symes R. et al, (2026), The Lancet Infectious Diseases, 26, 229 - 238

Risk Factors of Metabolic Dysfunction-associated Steatotic Liver Disease in a Cohort of Patients With Chronic Hepatitis B

Kalafateli M. et al, (2026), Clinical Gastroenterology and Hepatology, 24, 701 - 712.e8

HepB-boost: Implementation of free-of-charge health care worker hepatitis B testing and vaccination at Kilifi County Referral Hospital, Kenya

Downs LO. et al, (2026), International Journal of Infectious Diseases, 164, 108418 - 108418

Addressing pandemic-wide systematic errors in the SARS-CoV-2 phylogeny

Hunt M. et al, (2026), Nature Methods, 23, 653 - 662

Modelling catastrophic extinction in stochastic birth-death process: Analytical insights, estimation, and efficient simulation

Twumasi C., (2026), Computational Statistics & Data Analysis, 215, 108302 - 108302

British Society of Gastroenterology guidelines on colorectal surveillance in inflammatory bowel disease

East JE. et al, (2026), Gut, 75, 442 - 475

The Role of Fibroblast–Epithelial Cross-Talk on the Distribution of Distinct Fibroblast Phenotypes in the Intestinal Crypt

Atkinson G. et al, (2026), Bulletin of Mathematical Biology, 88

The potential of a centrally implemented system for national surveillance of bloodstream infections in England, compared to current local surveillance, 2023–2024

Cregan J. et al, (2026), Journal of Hospital Infection, 169, 5 - 14

Artificial intelligence-supported polyp detection (CADe) at colonoscopy reduces the detection of high grade dysplasia and invasive cancer

Henry DX. and East JE., (2026), Endoscopy, 58, 314 - 315

Patterns of testing and the high burden of iron deficiency anaemia in cirrhosis: a national cohort study

Maynard S. et al, (2026), Blood Red Cells & Iron, 100070 - 100070

A National Evaluation of Intercostal Chest Drain Removal Strategies

Veale N. et al, (2026), CHEST, 169, 849 - 858

Patterns of HIV-1 viral load suppression and drug resistance during the dolutegravir transition: a population-based longitudinal study.

Martin MA. et al, (2026), Clinical infectious diseases : an official publication of the Infectious Diseases Society of America

Pleural Manometry in Tension Pneumothorax: A Step in Physiologic Precision.

Elsheikh A. and Rahman NM., (2026), Chest, 169, 589 - 591

Optimising Primary thErapy in pRimAry biliary cholangitis (OPERA): protocol for a randomised, double-blind, placebo-controlled trial of enhanced primary therapy with obeticholic acid.

Dunn S. et al, (2026), BMJ open, 16

Self-supervised Monocular Depth and Pose Estimation for Endoscopy with Latent Priors.

Xu Z. et al, (2026), IEEE transactions on medical imaging, PP

ERS Congress 2025: highlights from the Thoracic Oncology Assembly.

Heuvelmans MA. et al, (2026), ERJ open research, 12, 1849 - 2025

Efficacy and Safety of Obexelimab to Treat IgG4-Related Disease: Protocol for a Global, Randomized, Placebo-Controlled Trial.

Culver EL. et al, (2026), Rheumatology and therapy

Environmental impact of computer-aided diagnosis in colonoscopy: a carbon footprint assessment of a prospective study cohort.

Olabintan O. et al, (2026), Endoscopy, 58, 303 - 309

Nanopore long-read-only genome assembly of clinical Enterobacterales isolates is complete and accurate

Nagy D. et al, (2026), Microbial Genomics, 12

Comprehensive mRNA annotation in trypanosomatid parasites

Dobramysl U. and Wheeler RJ., (2026)

Body Composition Changes in Children Living With HIV Initiated on Dolutegravir or Protease Inhibitors in the CHAPAS-4 Trial

Natukunda E. et al, (2026), Pediatric Infectious Disease Journal

Bioinformatic identification of lentivirus transfer plasmid contamination causing false-positive HIV NAT results in a high-throughput molecular screening laboratory

Secret S. et al, (2026), Microbiology Spectrum

A Python module for programmatic access to TrypTag genome-wide subcellular protein localisation data in Trypanosoma brucei

Dobramysl U. and Wheeler RJ., (2026)

Longitudinal changes in bone mineral density among children living with HIV over 96 weeks following switch to second-line antiretroviral therapy in Uganda

Natukunda E. et al, (2026), PLOS Global Public Health, 6, e0005979 - e0005979

A factor integrating transcription and repression of surface antigen genes in African trypanosomes

Berazategui MA. et al, (2026), Proceedings of the National Academy of Sciences, 123

Review of the British Thoracic Society Winter Meeting 26–29 November 2025

Flynn CA. et al, (2026), Thorax

Clinical validation of a novel metagenomic nanopore sequencing method for detecting viral respiratory pathogens: diagnostic accuracy study

Sanderson ND. et al, (2026)

Evaluation of an Oxford Nanopore sequencing workflow for mycobacteria from primary MGIT culture

Baker CS. et al, (2026)

Pharmacokinetics and safety of fosfomycin and flomoxef administered as part of neonatal sepsis treatment (NeoSep1 Part 1)

Bekker A. et al, (2026), Antimicrobial Agents and Chemotherapy, 70

Defining recurrent urinary tract infection and reinfection risk: electronic health record study

Vazquez-Montes MDLA. et al, (2026), BJGP Open, BJGPO.2025.0239 - BJGPO.2025.0239

T cell immunity predicts clinical outcomes on stopping antiretroviral treatment after HIV-specific broadly neutralising antibody therapy

Altaf M. et al, (2026)

Efficacy and acceptability of bowel preparation strategies for inflammatory bowel disease colonoscopy: Systematic review and meta-analysis

Nigam GB. et al, (2026), Endoscopy International Open, 14

Short-Lived Success: Carbapenem-Resistant Enterobacterales Recolonization in Sinks Following Repeated Peroxide-Peracetic Acid-Based Foam Disinfection

Kotay S. et al, (2026)

Response to Comments on ‘Hepatitis B Virus ( HBV ) Treatment Eligibility in the UK : Retrospective Longitudinal Cohort Data to Explore the Impact of Changes in Clinical Guidelines’

Campbell C. et al, (2026), Journal of Viral Hepatitis, 33

Professional Standards in Thoracic Ultrasound – EFSUMB Position Paper

Laursen CB. et al, (2026), Ultraschall in der Medizin - European Journal of Ultrasound, 47, 42 - 50

Rapamycin Exerts Its Geroprotective Effects in the Ageing Human Immune System by Enhancing Resilience Against DNA Damage

Kell L. et al, (2026), Aging Cell, 25

ACE2 inhibition ELISA is an effective surrogate for SARS-CoV-2 live virus neutralisation

Tipton T. et al, (2026), Vaccine, 72, 128123 - 128123

ALARUM: Active One Health surveillance in LMICs to monitor and predict Antimicrobial Resistance Using Metagenomics – a cross-sectional study protocol

van der Sande MAB. et al, (2026), BMJ Open, 16, e107465 - e107465

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Publications 2017-2018