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Publications

Identifying Bacterial Airways Infection in Stable Severe Asthma Using Oxford Nanopore Sequencing Technologies

Jabeen MF. et al, (2022), Microbiology Spectrum, 10

An Observational Cohort Study on the Incidence of Severe Acute Respiratory Syndrome Coronavirus 2 (SARS-CoV-2) Infection and B.1.1.7 Variant Infection in Healthcare Workers by Antibody and Vaccination Status

Lumley SF. et al, (2022), Clinical Infectious Diseases, 74, 1208 - 1219

Clinical Metagenomic Sequencing for Species Identification and Antimicrobial Resistance Prediction in Orthopedic Device Infection.

Street TL. et al, (2022), J Clin Microbiol

A haemagglutination test for rapid detection of antibodies to SARS-CoV-2

Townsend A. et al, (2021), Nature Communications, 12

Epidemiological data and genome sequencing reveals that nosocomial transmission of SARS-CoV-2 is underestimated and mostly mediated by a small number of highly infectious individuals

Lumley SF. et al, (2021), Journal of Infection, 83, 473 - 482

Metagenomic Sequencing as a Pathogen-Agnostic Clinical Diagnostic Tool for Infectious Diseases: a Systematic Review and Meta-analysis of Diagnostic Test Accuracy Studies.

Govender KN. et al, (2021), Journal of clinical microbiology, 59

Clinical Metagenomic Sequencing for Species Identification and Antimicrobial Resistance Prediction in Orthopaedic Device Infection

Street TL. et al, (2021)

High precision Neisseria gonorrhoeae variant and antimicrobial resistance calling from metagenomic Nanopore sequencing

Sanderson ND. et al, (2020), Genome Research, 30, 1354 - 1363

A Systematic Review of Metagenomic Sequencing as a Clinical Diagnostic Tool for Infectious Diseases

Govender KN. et al, (2020)

Optimizing DNA Extraction Methods for Nanopore Sequencing of Neisseria gonorrhoeae Directly from Urine Samples

Street TL. et al, (2019), Journal of Clinical Microbiology, 58

Detection in the United Kingdom of the Neisseria gonorrhoeae FC428 clone, with ceftriaxone resistance and intermediate resistance to azithromycin, October to December 2018.

Eyre DW. et al, (2019), Euro surveillance : bulletin Europeen sur les maladies transmissibles = European communicable disease bulletin, 24

Real-time analysis of nanopore-based metagenomic sequencing from infected orthopaedic devices.

Sanderson ND. et al, (2018), BMC Genomics, 19

Molecular Diagnosis of Orthopedic-Device-Related Infection Directly from Sonication Fluid by Metagenomic Sequencing.

Street TL. et al, (2017), Journal of clinical microbiology, 55, 2334 - 2347

Absence of Atypical Pathogens in Pleural Infection.

Wrightson JM. et al, (2015), Chest, 148, e102 - e103

PREDICTORS OF BACTERIAL 'LOAD' IN PLEURAL INFECTION

Wrightson JM. et al, (2014), THORAX, 69, A60 - A61

PREVIOUSLY UNRECOGNISED ORAL ANAEROBES IN PLEURAL INFECTION

Wrightson JM. et al, (2014), THORAX, 69, A61 - A62

A genome-wide association study of atopic dermatitis identifies loci with overlapping effects on asthma and psoriasis.

Weidinger S. et al, (2013), Hum Mol Genet, 22, 4841 - 4856

Within-host evolution of Staphylococcus aureus during asymptomatic carriage.

Golubchik T. et al, (2013), PLoS One, 8

A fine-scale chimpanzee genetic map from population sequencing.

Auton A. et al, (2012), Science, 336, 193 - 198

Pneumococcal genome sequencing tracks a vaccine escape variant formed through a multi-fragment recombination event

Golubchik T. et al, (2012), Nature Genetics, 44, 352 - 355

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