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Publications

Improving nitrofurantoin resistance prediction in Escherichia coli from whole-genome sequence by integrating NfsA/B enzyme assays

Dulyayangkul P. et al, (2024), Antimicrobial Agents and Chemotherapy, 68

Harvesting and amplifying gene cassettes confers cross-resistance to critically important antibiotics.

Dulyayangkul P. et al, (2024), PLoS pathogens, 20

Genomic epidemiology of third-generation cephalosporin-resistant Escherichia coli from Argentinian pig and dairy farms reveals animal-specific patterns of co-resistance and resistance mechanisms

Mounsey O. et al, (2024), Applied and Environmental Microbiology

Hound: a novel tool for automated mapping of genotype to phenotype in bacterial genomes assembled de novo

Reding C. et al, (2024), Briefings in Bioinformatics, 25

Predicting the re-distribution of antibiotic molecules caused by inter-species interactions in microbial communities

Reding C., (2022), ISME Communications, 2

The Antibiotic Dosage of Fastest Resistance Evolution: Gene Amplifications Underpinning the Inverted-U

Reding C. et al, (2021), Molecular Biology and Evolution, 38, 3847 - 3863

Plasmid carriage and the unorthodox use of fitness in microbiology

Reding C., (2019)

Fluorescence photography of patterns and waves of bacterial adaptation at high antibiotic doses

Reding C. et al, (2019)

The unconstrained evolution of fast and efficient antibiotic-resistant bacterial genomes

Reding-Roman C. et al, (2017), Nature Ecology & Evolution, 1

Using a Sequential Regimen to Eliminate Bacteria at Sublethal Antibiotic Dosages

Fuentes-Hernandez A. et al, (2015), PLOS Biology, 13, e1002104 - e1002104

Testing the optimality properties of a dual antibiotic treatment in a two-locus, two-allele model

Peña-Miller R. et al, (2014), Journal of The Royal Society Interface, 11, 20131035 - 20131035

Include forthcoming?