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Publications 2020

Combining Charlson and Elixhauser scores with varying lookback predicated mortality better than using individual scores. Pritchard E, Fawcett N, Quan T P, et al.

https://www.jclinepi.com/article/S0895-4356(20)31106-9/fulltext

Diagnosis of SARS-CoV-2 infection with LamPORE, a highthroughput platform combining loop-mediated isothermal amplification and nanopore sequencing. Peto L, Rodger G, Carter DP, et al.

https://medrxiv.org/cgi/content/short/2020.09.18.20195370v1 

Viral load in community SARS-CoV-2 cases varies widely and temporally. Walker AS, Pritchard E, House T, et al.

https://www.medrxiv.org/content/10.1101/2020.10.25.20219048v1 

 

Differential occupational risks to healthcare workers from SARS-CoV-2: A prospective observational study. Eyre DW, Lumley SF,  O’Donnell D, et al.

https://www.medrxiv.org/content/10.1101/2020.06.24.20135038v2

Healthcare-associated COVID-19 in England: a national data linkage study. Bhattacharya A, Collin S M, Stimson J, et al.

https://www.medrxiv.org/content/10.1101/2021.02.16.21251625v1

SARS-CoV-2 infection rates of antibody-positive compared with antibody-negative health-care workers in England: a large, multicentre, prospective cohort study (SIREN). Hall V J, Foulkes S, Charlett A, et al.

https://linkinghub.elsevier.com/retrieve/pii/S0140-6736(21)00675-9

Antibody Status and Incidence of SARS-CoV-2 Infection in Health Care Workers. Lumley S F, O’Donnell D, Stoesser N, et al.

https://www.nejm.org/doi/full/10.1056/NEJMoa2034545

The Duration, Dynamics, and Determinants of Severe Acute Respiratory Syndrome Coronavirus 2 (SARS-CoV-2) Antibody Responses in Individual Healthcare Workers. Lumley S, Wei J, O’ Donnell D, et al.

https://academic.oup.com/cid/advance-article/doi/10.1093/cid/ciab004/6064824.

The contribution of hospital-acquired infections to the COVID-19 epidemic in England in the first half of 2020. Knight G M, Pham T M, Stimson J. et al.

https://www.medrxiv.org/content/10.1101/2021.09.02.21262480v1

The impact of testing and infection prevention and control strategies on within-hospital transmission dynamics of COVID-19 in English hospitals. Evans S, Agnew E, Vynnycky E. et al.

https://royalsocietypublishing.org/doi/10.1098/rstb.2020.0268

Flanker: a tool for comparative genomics of gene flanking regions.  Matlock W, Lipworth S, Constantinides B. et al.

https://www.biorxiv.org/content/10.1101/2021.02.22.432255v1

Ten-year longitudinal molecular epidemiology study of Escherichia coli and Klebsiella species bloodstream infections in Oxfordshire, UK. Lipworth S, Vihta K, Chau K, et al.

https://genomemedicine.biomedcentral.com/articles/10.1186/s13073-021-00947-2