Cookies on this website

We use cookies to ensure that we give you the best experience on our website. If you click 'Accept all cookies' we'll assume that you are happy to receive all cookies and you won't see this message again. If you click 'Reject all non-essential cookies' only necessary cookies providing core functionality such as security, network management, and accessibility will be enabled. Click 'Find out more' for information on how to change your cookie settings.

Contact information

Email
david.bonsall@bdi.ox.ac.uk

Research groups

Barnes Group

David Bonsall

Recent publications

Identification and Masking of Artefactual and Misleading Within-Host Variants in Deep-Sequencing SARS-CoV-2 Data.

Anker KM. et al, (2026), Mol Biol Evol

Patterns of HIV-1 Viral Load Suppression and Drug Resistance During the Dolutegravir Transition: A Population-based Longitudinal Study.

Martin MA. et al, (2026), Clinical infectious diseases : an official publication of the Infectious Diseases Society of America, 82, e1242 - e1251

The cumulative incidence and infection hospitalization risk of SARS-CoV-2 by variant: a longitudinal study in England

Gaughan C. et al, (2026), American Journal of Epidemiology, 195, 188 - 197

HIV drug resistance during antiretroviral therapy scale-up in Uganda, 2012–19: a population-based, longitudinal study

Martin MA. et al, (2025), The Lancet Microbe, 6, 101218 - 101218

HIV-phyloTSI: subtype-independent estimation of time since HIV-1 infection for cross-sectional measures of population incidence using deep sequence data

Golubchik T. et al, (2025), BMC Bioinformatics, 26

More publications