Cookies on this website

We use cookies to ensure that we give you the best experience on our website. If you click 'Accept all cookies' we'll assume that you are happy to receive all cookies and you won't see this message again. If you click 'Reject all non-essential cookies' only necessary cookies providing core functionality such as security, network management, and accessibility will be enabled. Click 'Find out more' for information on how to change your cookie settings.

Accept all cookies Reject all non-essential cookies Find out more

Publications

Social media

HPRU PUBLICATIONS

2025 

  • Interplay between C-reactive protein responses and antibiotic prescribing in people with suspected infection. GuQ, Yuan K, Wei J, Yoon CH, Danielsen AS, Luk A, et al. 

https://bmcinfectdis.biomedcentral.com/articles/10.1186/s12879-025-11381-9

  • Case ascertainment of a potential centrally-implemented, automated system for national surveillance of healthcare-associated infections, England, 2016 to 2023.  Cregan J, Nsonwu O. Chudasama D, Hopkins S, Muller-Pebody B, Hope R, et al. 

https://www.eurosurveillance.org/content/10.2807/1560-7917.ES.2025.30.42.2500066

  • Escherichia coli phylogeny drives co-amoxiclav resistance through variable expression of TEM-1 beta-lactamase. Matlock W, Rodger G, Pritchard E, Colpus M, Kapel N, Barrett L, et al. 

https://www.nature.com/articles/s41467-025-63714-6

  • The impact of inter-infection time on antimicrobial resistance profiles in women with multiple urinary tract infections over time. Honda T, Vazquez-Montes MDLA, Fanshawe TR, Stoesser N, Butler CC, Walker AS, et al. 

https://pubmed.ncbi.nlm.nih.gov/40581812/

  • Estimating the effect of antimicrobial resistance genes on minimum inhibitory concentration in Escherichia coli. Lipworth S, Chau K, Oakley S, Barrett Lucinda, Crrok Derrick, Peto T, et al. 

https://www.thelancet.com/journals/lanmic/article/PIIS2666-5247(25)00111-9/fulltext

  • Evaluating 12 automated, whole-genome sequencing analysis pipelines for Mycobacterium tuberculosis complex: a comparative study. Spies R, Crook DW, Peto TEA, Fowler PW, Turner R, Thai H, et al. 

         https://www.thelancet.com/journals/lanmic/article/PIIS2666-5247(25)00138-7/fulltext

  • Rapid, accurate, and reproducible de novo prediction of resistance to antituberculars. Zhang X, Wan S, Bhati AP, Fowler PW, Coveney PV. 

        https://journals.asm.org/doi/10.1128/msphere.00571-25

  • An improved catalogue for whole-genome sequencing prediction of bedaquiline resistance in M. tuberculosis using a reproducible algorithmic approach. Adhlard D, Joseph L, Webster H, O'Reilly A, Knaggs J, Peto TEA, et al. 

         https://www.microbiologyresearch.org/content/journal/mgen/10.1099/mgen.0.001429

  • An electronic health record-wide association study to identify populations at increased risk of E. coli bacteraemia. Pritchard E, Vihta K, Lipworth S, Pouwels KB, Stoesser N, Hope R, et al. 

        https://www.sciencedirect.com/science/article/pii/S0163445325002129

  • Subpopulations in clinical samples of M. tuberculosis can give rise to rifampicin resistance and shed light on how resistance is acquired. Brunner V, Fowler P. 

         https://academic.oup.com/jacamr/article/7/5/dlaf175/8279675?login=false

  • Dissemination of OXA-23 carbapenemase in Proteus mirabilis and Escherichia coli driven by transposon-carrying lineages. Zamudio R, Osman K, Pike R, Chaudhry A, Meunier D, Stoesser N, et al. 

         https://www.microbiologyresearch.org/content/journal/mgen/10.1099/mgen.0.001502

  • Stop antibiotics when you feel better? Opportunities, challenges and research directions. Borek AJ, Ledda A, Pouwels KB, Butler CC, Hayward G, Walker AS et al. 

         https://academic.oup.com/jacamr/article/6/5/dlae147/7753463

  • Timeliness of a potential automated system for national surveillance of healthcare-associated infections in England. Quan TP, Eyre D, Shadwell S, West D, Hopkins S, Chudasama D, et al. 
    https://pubmed.ncbi.nlm.nih.gov/40288583/
  • General practice antibiotic prescriptions attributable to respiratory syncytial virus by age and antibiotic class: an ecological analysis of the English population. Miller L, Beaney T, Hope R, Cunningham M, Robotham J, Powels K, et al. 
    https://academic.oup.com/jac/article/80/4/1116/8023879
  • Rapid antibiotic susceptibility testing for urinary tract infections in secondary care in England: a cost-effectiveness analysis. Booton RD, Agnew E, Pople D, Evans S, Bock LJ, Sutton MJ, et al. 
    https://bmjopen.bmj.com/content/14/11/e081865