Cookies on this website

We use cookies to ensure that we give you the best experience on our website. If you click 'Accept all cookies' we'll assume that you are happy to receive all cookies and you won't see this message again. If you click 'Reject all non-essential cookies' only necessary cookies providing core functionality such as security, network management, and accessibility will be enabled. Click 'Find out more' for information on how to change your cookie settings.

Significance Tree-like structures are abundant in the empirical sciences as they can summarize high-dimensional data and show latent structure among many samples in a single framework. Prominent examples include phylogenetic trees or hierarchical clustering derived from genetic data. Currently, users employ ad hoc methods to test for association between a given tree and a response variable, which reduces reproducibility and robustness. In this paper, we introduce treeSeg, a simple to use and widely applicable methodology with high power for testing between all levels of hierarchy for a given tree and the response while accounting for the overall false positive rate. Our method allows for precise uncertainty quantification and therefore, increases interpretability and reproducibility of such studies across many fields of science.

More information Original publication

DOI

10.1073/pnas.1912957117

Type

Journal article

Publisher

Proceedings of the National Academy of Sciences

Publication Date

2020-05-05T00:00:00+00:00

Volume

117

Pages

9787 - 9792

Total pages

5