{
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        "\n\n    <div class=\"listing-item listing-item-publication\" itemscope itemprop=\"itemListElement\" itemtype=\"http://schema.org/PublicationVolume\">\n\n        <div class=\"row\">\n\n            \n\n            <div class=\"col-xs-12\">\n                            \n                \n                    <div class=\"float-end\">\n                        \n                    </div>\n                \n            \n                <h2>\n                    <a href=\"publication_modal/1236007\" title=\"SARS-CoV-2 Omicron-B.1.1.529 leads to widespread escape from neutralizing antibody responses\" class=\"pat-plone-modal\" data-pat-plone-modal='{\"buttons\":\".formControls a\"}' itemprop=\"name\">SARS-CoV-2 Omicron-B.1.1.529 leads to widespread escape from neutralizing antibody responses</a>\n                </h2>\n  \n                \n                    <p class=\"categories-list\">\n                        <a href=\"https://www.expmedndm.ox.ac.uk/publications/search?type=1\" title=\"Journal article\">\n                            <span class=\"badge bg-primary\">Journal article</span>\n                        </a>\n                    </p>\n                \n\n                \n                \n                        \n                    <p itemprop=\"description\">Dejnirattisai W. et al, (2022), Cell, 185, 467 - 484.e15</p>\n                \n                        \n                \n                    <p>\n                        <div class=\"altmetric-embed\" data-badge-type=\"\" data-doi=\"10.1016/j.cell.2021.12.046\" data-link-target=\"_blank\"></div>\n                    </p>\n                \n                \n            </div>\n\n        </div>\n\n    </div>\n\n\n",
        "\n\n    <div class=\"listing-item listing-item-publication\" itemscope itemprop=\"itemListElement\" itemtype=\"http://schema.org/PublicationVolume\">\n\n        <div class=\"row\">\n\n            \n\n            <div class=\"col-xs-12\">\n                            \n                \n                    <div class=\"float-end\">\n                        \n                    </div>\n                \n            \n                <h2>\n                    <a href=\"publication_modal/1225718\" title=\"Parenchymal involvement on CT pulmonary angiography in SARS-CoV-2 Alpha variant infection and correlation of COVID-19 CT severity score with clinical disease severity and short-term prognosis in a UK cohort\" class=\"pat-plone-modal\" data-pat-plone-modal='{\"buttons\":\".formControls a\"}' itemprop=\"name\">Parenchymal involvement on CT pulmonary angiography in SARS-CoV-2 Alpha variant infection and correlation of COVID-19 CT severity score with clinical disease severity and short-term prognosis in a UK cohort</a>\n                </h2>\n  \n                \n                    <p class=\"categories-list\">\n                        <a href=\"https://www.expmedndm.ox.ac.uk/publications/search?type=1\" title=\"Journal article\">\n                            <span class=\"badge bg-primary\">Journal article</span>\n                        </a>\n                    </p>\n                \n\n                \n                \n                        \n                    <p itemprop=\"description\">Tsakok MT. et al, (2022), Clinical Radiology, 77, 148 - 155</p>\n                \n                        \n                \n                    <p>\n                        <div class=\"altmetric-embed\" data-badge-type=\"\" data-doi=\"10.1016/j.crad.2021.11.002\" data-link-target=\"_blank\"></div>\n                    </p>\n                \n                \n            </div>\n\n        </div>\n\n    </div>\n\n\n",
        "\n\n    <div class=\"listing-item listing-item-publication\" itemscope itemprop=\"itemListElement\" itemtype=\"http://schema.org/PublicationVolume\">\n\n        <div class=\"row\">\n\n            \n\n            <div class=\"col-xs-12\">\n                            \n                \n                    <div class=\"float-end\">\n                        \n                    </div>\n                \n            \n                <h2>\n                    <a href=\"publication_modal/1259253\" title=\"ReadItAndKeep: rapid decontamination of SARS-CoV-2 sequencing reads\" class=\"pat-plone-modal\" data-pat-plone-modal='{\"buttons\":\".formControls a\"}' itemprop=\"name\">ReadItAndKeep: rapid decontamination of SARS-CoV-2 sequencing reads</a>\n                </h2>\n  \n                \n                    <p class=\"categories-list\">\n                        <a href=\"https://www.expmedndm.ox.ac.uk/publications/search?type=7\" title=\"Preprint\">\n                            <span class=\"badge bg-primary\">Preprint</span>\n                        </a>\n                    </p>\n                \n\n                \n                \n                        \n                    <p itemprop=\"description\">Hunt M. et al, (2022)</p>\n                \n                        \n                \n                    <p>\n                        <div class=\"altmetric-embed\" data-badge-type=\"\" data-doi=\"10.1101/2022.01.21.477194\" data-link-target=\"_blank\"></div>\n                    </p>\n                \n                \n            </div>\n\n        </div>\n\n    </div>\n\n\n",
        "\n\n    <div class=\"listing-item listing-item-publication\" itemscope itemprop=\"itemListElement\" itemtype=\"http://schema.org/PublicationVolume\">\n\n        <div class=\"row\">\n\n            \n\n            <div class=\"col-xs-12\">\n                            \n                \n                    <div class=\"float-end\">\n                        \n                    </div>\n                \n            \n                <h2>\n                    <a href=\"publication_modal/1279497\" title=\"Rapid turnaround multiplex sequencing of SARS-CoV-2: comparing tiling amplicon protocol performance\" class=\"pat-plone-modal\" data-pat-plone-modal='{\"buttons\":\".formControls a\"}' itemprop=\"name\">Rapid turnaround multiplex sequencing of SARS-CoV-2: comparing tiling amplicon protocol performance</a>\n                </h2>\n  \n                \n                    <p class=\"categories-list\">\n                        <a href=\"https://www.expmedndm.ox.ac.uk/publications/search?type=7\" title=\"Preprint\">\n                            <span class=\"badge bg-primary\">Preprint</span>\n                        </a>\n                    </p>\n                \n\n                \n                \n                        \n                    <p itemprop=\"description\">Constantinides B. et al, (2022)</p>\n                \n                        \n                \n                    <p>\n                        <div class=\"altmetric-embed\" data-badge-type=\"\" data-doi=\"10.1101/2021.12.28.21268461\" data-link-target=\"_blank\"></div>\n                    </p>\n                \n                \n            </div>\n\n        </div>\n\n    </div>\n\n\n",
        "\n\n    <div class=\"listing-item listing-item-publication\" itemscope itemprop=\"itemListElement\" itemtype=\"http://schema.org/PublicationVolume\">\n\n        <div class=\"row\">\n\n            \n\n            <div class=\"col-xs-12\">\n                            \n                \n                    <div class=\"float-end\">\n                        \n                    </div>\n                \n            \n                <h2>\n                    <a href=\"publication_modal/1766053\" title=\"Respiratory virome profiles reflect antiviral immune responses\" class=\"pat-plone-modal\" data-pat-plone-modal='{\"buttons\":\".formControls a\"}' itemprop=\"name\">Respiratory virome profiles reflect antiviral immune responses</a>\n                </h2>\n  \n                \n                    <p class=\"categories-list\">\n                        <a href=\"https://www.expmedndm.ox.ac.uk/publications/search?type=7\" title=\"Preprint\">\n                            <span class=\"badge bg-primary\">Preprint</span>\n                        </a>\n                    </p>\n                \n\n                \n                \n                        \n                    <p itemprop=\"description\">Rubi\u00f3 JR. et al, (2022)</p>\n                \n                        \n                \n                    <p>\n                        <div class=\"altmetric-embed\" data-badge-type=\"\" data-doi=\"10.22541/au.166004337.72266313/v1\" data-link-target=\"_blank\"></div>\n                    </p>\n                \n                \n            </div>\n\n        </div>\n\n    </div>\n\n\n",
        "\n\n    <div class=\"listing-item listing-item-publication\" itemscope itemprop=\"itemListElement\" itemtype=\"http://schema.org/PublicationVolume\">\n\n        <div class=\"row\">\n\n            \n\n            <div class=\"col-xs-12\">\n                            \n                \n                    <div class=\"float-end\">\n                        \n                    </div>\n                \n            \n                <h2>\n                    <a href=\"publication_modal/1230495\" title=\"Omicron-B.1.1.529 leads to widespread escape from neutralizing antibody responses\" class=\"pat-plone-modal\" data-pat-plone-modal='{\"buttons\":\".formControls a\"}' itemprop=\"name\">Omicron-B.1.1.529 leads to widespread escape from neutralizing antibody responses</a>\n                </h2>\n  \n                \n                    <p class=\"categories-list\">\n                        <a href=\"https://www.expmedndm.ox.ac.uk/publications/search?type=7\" title=\"Preprint\">\n                            <span class=\"badge bg-primary\">Preprint</span>\n                        </a>\n                    </p>\n                \n\n                \n                \n                        \n                    <p itemprop=\"description\">Dejnirattisai W. et al, (2021)</p>\n                \n                        \n                \n                    <p>\n                        <div class=\"altmetric-embed\" data-badge-type=\"\" data-doi=\"10.1101/2021.12.03.471045\" data-link-target=\"_blank\"></div>\n                    </p>\n                \n                \n            </div>\n\n        </div>\n\n    </div>\n\n\n",
        "\n\n    <div class=\"listing-item listing-item-publication\" itemscope itemprop=\"itemListElement\" itemtype=\"http://schema.org/PublicationVolume\">\n\n        <div class=\"row\">\n\n            \n\n            <div class=\"col-xs-12\">\n                            \n                \n                    <div class=\"float-end\">\n                        \n                    </div>\n                \n            \n                <h2>\n                    <a href=\"publication_modal/1188884\" title=\"Epidemiological data and genome sequencing reveals that nosocomial transmission of SARS-CoV-2 is underestimated and mostly mediated by a small number of highly infectious individuals\" class=\"pat-plone-modal\" data-pat-plone-modal='{\"buttons\":\".formControls a\"}' itemprop=\"name\">Epidemiological data and genome sequencing reveals that nosocomial transmission of SARS-CoV-2 is underestimated and mostly mediated by a small number of highly infectious individuals</a>\n                </h2>\n  \n                \n                    <p class=\"categories-list\">\n                        <a href=\"https://www.expmedndm.ox.ac.uk/publications/search?type=1\" title=\"Journal article\">\n                            <span class=\"badge bg-primary\">Journal article</span>\n                        </a>\n                    </p>\n                \n\n                \n                \n                        \n                    <p itemprop=\"description\">Lumley SF. et al, (2021), Journal of Infection, 83, 473 - 482</p>\n                \n                        \n                \n                    <p>\n                        <div class=\"altmetric-embed\" data-badge-type=\"\" data-doi=\"10.1016/j.jinf.2021.07.034\" data-link-target=\"_blank\"></div>\n                    </p>\n                \n                \n            </div>\n\n        </div>\n\n    </div>\n\n\n",
        "\n\n    <div class=\"listing-item listing-item-publication\" itemscope itemprop=\"itemListElement\" itemtype=\"http://schema.org/PublicationVolume\">\n\n        <div class=\"row\">\n\n            \n\n            <div class=\"col-xs-12\">\n                            \n                \n                    <div class=\"float-end\">\n                        \n                    </div>\n                \n            \n                <h2>\n                    <a href=\"publication_modal/1182945\" title=\"Flanker: a tool for comparative genomics of gene flanking regions\" class=\"pat-plone-modal\" data-pat-plone-modal='{\"buttons\":\".formControls a\"}' itemprop=\"name\">Flanker: a tool for comparative genomics of gene flanking regions</a>\n                </h2>\n  \n                \n                    <p class=\"categories-list\">\n                        <a href=\"https://www.expmedndm.ox.ac.uk/publications/search?type=1\" title=\"Journal article\">\n                            <span class=\"badge bg-primary\">Journal article</span>\n                        </a>\n                    </p>\n                \n\n                \n                \n                        \n                    <p itemprop=\"description\">Matlock W. et al, (2021), Microbial Genomics, 7</p>\n                \n                        \n                \n                    <p>\n                        <div class=\"altmetric-embed\" data-badge-type=\"\" data-doi=\"10.1099/mgen.0.000634\" data-link-target=\"_blank\"></div>\n                    </p>\n                \n                \n            </div>\n\n        </div>\n\n    </div>\n\n\n",
        "\n\n    <div class=\"listing-item listing-item-publication\" itemscope itemprop=\"itemListElement\" itemtype=\"http://schema.org/PublicationVolume\">\n\n        <div class=\"row\">\n\n            \n\n            <div class=\"col-xs-12\">\n                            \n                \n                    <div class=\"float-end\">\n                        \n                    </div>\n                \n            \n                <h2>\n                    <a href=\"publication_modal/1206103\" title=\"Enhancing epidemiological investigation of nosocomial SARS-CoV-2 infection with whole genome sequencing: A retrospective cohort study across four hospitals in the UK\" class=\"pat-plone-modal\" data-pat-plone-modal='{\"buttons\":\".formControls a\"}' itemprop=\"name\">Enhancing epidemiological investigation of nosocomial SARS-CoV-2 infection with whole genome sequencing: A retrospective cohort study across four hospitals in the UK</a>\n                </h2>\n  \n                \n                    <p class=\"categories-list\">\n                        <a href=\"https://www.expmedndm.ox.ac.uk/publications/search?type=7\" title=\"Preprint\">\n                            <span class=\"badge bg-primary\">Preprint</span>\n                        </a>\n                    </p>\n                \n\n                \n                \n                        \n                    <p itemprop=\"description\">Lumley SF. et al, (2021)</p>\n                \n                        \n                \n                    <p>\n                        <div class=\"altmetric-embed\" data-badge-type=\"\" data-doi=\"10.1101/2021.06.28.21259028\" data-link-target=\"_blank\"></div>\n                    </p>\n                \n                \n            </div>\n\n        </div>\n\n    </div>\n\n\n",
        "\n\n    <div class=\"listing-item listing-item-publication\" itemscope itemprop=\"itemListElement\" itemtype=\"http://schema.org/PublicationVolume\">\n\n        <div class=\"row\">\n\n            \n\n            <div class=\"col-xs-12\">\n                            \n                \n                    <div class=\"float-end\">\n                        \n                    </div>\n                \n            \n                <h2>\n                    <a href=\"publication_modal/1178281\" title=\"An observational cohort study on the incidence of SARS-CoV-2 infection and B.1.1.7 variant infection in healthcare workers by antibody and vaccination status\" class=\"pat-plone-modal\" data-pat-plone-modal='{\"buttons\":\".formControls a\"}' itemprop=\"name\">An observational cohort study on the incidence of SARS-CoV-2 infection and B.1.1.7 variant infection in healthcare workers by antibody and vaccination status</a>\n                </h2>\n  \n                \n                    <p class=\"categories-list\">\n                        <a href=\"https://www.expmedndm.ox.ac.uk/publications/search?type=7\" title=\"Preprint\">\n                            <span class=\"badge bg-primary\">Preprint</span>\n                        </a>\n                    </p>\n                \n\n                \n                \n                        \n                    <p itemprop=\"description\">Lumley SF. et al, (2021)</p>\n                \n                        \n                \n                    <p>\n                        <div class=\"altmetric-embed\" data-badge-type=\"\" data-doi=\"10.1101/2021.03.09.21253218\" data-link-target=\"_blank\"></div>\n                    </p>\n                \n                \n            </div>\n\n        </div>\n\n    </div>\n\n\n",
        "\n\n    <div class=\"listing-item listing-item-publication\" itemscope itemprop=\"itemListElement\" itemtype=\"http://schema.org/PublicationVolume\">\n\n        <div class=\"row\">\n\n            \n\n            <div class=\"col-xs-12\">\n                            \n                \n                    <div class=\"float-end\">\n                        \n                    </div>\n                \n            \n                <h2>\n                    <a href=\"publication_modal/1230633\" title=\"Flanker: a tool for comparative genomics of gene flanking regions\" class=\"pat-plone-modal\" data-pat-plone-modal='{\"buttons\":\".formControls a\"}' itemprop=\"name\">Flanker: a tool for comparative genomics of gene flanking regions</a>\n                </h2>\n  \n                \n                    <p class=\"categories-list\">\n                        <a href=\"https://www.expmedndm.ox.ac.uk/publications/search?type=7\" title=\"Preprint\">\n                            <span class=\"badge bg-primary\">Preprint</span>\n                        </a>\n                    </p>\n                \n\n                \n                \n                        \n                    <p itemprop=\"description\">Matlock W. et al, (2021)</p>\n                \n                        \n                \n                    <p>\n                        <div class=\"altmetric-embed\" data-badge-type=\"\" data-doi=\"10.1101/2021.02.22.432255\" data-link-target=\"_blank\"></div>\n                    </p>\n                \n                \n            </div>\n\n        </div>\n\n    </div>\n\n\n",
        "\n\n    <div class=\"listing-item listing-item-publication\" itemscope itemprop=\"itemListElement\" itemtype=\"http://schema.org/PublicationVolume\">\n\n        <div class=\"row\">\n\n            \n\n            <div class=\"col-xs-12\">\n                            \n                \n                    <div class=\"float-end\">\n                        \n                    </div>\n                \n            \n                <h2>\n                    <a href=\"publication_modal/1750606\" title=\"A burst of regulatory and protein innovation at the origin of placental mammals drove the emergence of placenta and underpins divergent early pregnancy strategies in modern mammals\" class=\"pat-plone-modal\" data-pat-plone-modal='{\"buttons\":\".formControls a\"}' itemprop=\"name\">A burst of regulatory and protein innovation at the origin of placental mammals drove the emergence of placenta and underpins divergent early pregnancy strategies in modern mammals</a>\n                </h2>\n  \n                \n                    <p class=\"categories-list\">\n                        <a href=\"https://www.expmedndm.ox.ac.uk/publications/search?type=7\" title=\"Preprint\">\n                            <span class=\"badge bg-primary\">Preprint</span>\n                        </a>\n                    </p>\n                \n\n                \n                \n                        \n                    <p itemprop=\"description\">Taylor A. et al, (2021)</p>\n                \n                        \n                \n                    <p>\n                        <div class=\"altmetric-embed\" data-badge-type=\"\" data-doi=\"10.1101/2021.07.22.453388\" data-link-target=\"_blank\"></div>\n                    </p>\n                \n                \n            </div>\n\n        </div>\n\n    </div>\n\n\n",
        "\n\n    <div class=\"listing-item listing-item-publication\" itemscope itemprop=\"itemListElement\" itemtype=\"http://schema.org/PublicationVolume\">\n\n        <div class=\"row\">\n\n            \n\n            <div class=\"col-xs-12\">\n                            \n                \n                    <div class=\"float-end\">\n                        \n                    </div>\n                \n            \n                <h2>\n                    <a href=\"publication_modal/1106849\" title=\"Genomic surveillance of Escherichia coli and Klebsiella spp. in hospital sink drains and patients\" class=\"pat-plone-modal\" data-pat-plone-modal='{\"buttons\":\".formControls a\"}' itemprop=\"name\">Genomic surveillance of Escherichia coli and Klebsiella spp. in hospital sink drains and patients</a>\n                </h2>\n  \n                \n                    <p class=\"categories-list\">\n                        <a href=\"https://www.expmedndm.ox.ac.uk/publications/search?type=1\" title=\"Journal article\">\n                            <span class=\"badge bg-primary\">Journal article</span>\n                        </a>\n                    </p>\n                \n\n                \n                \n                        \n                    <p itemprop=\"description\">Constantinides B. et al, (2020), Microbial Genomics, 6</p>\n                \n                        \n                \n                    <p>\n                        <div class=\"altmetric-embed\" data-badge-type=\"\" data-doi=\"10.1099/mgen.0.000391\" data-link-target=\"_blank\"></div>\n                    </p>\n                \n                \n            </div>\n\n        </div>\n\n    </div>\n\n\n",
        "\n\n    <div class=\"listing-item listing-item-publication\" itemscope itemprop=\"itemListElement\" itemtype=\"http://schema.org/PublicationVolume\">\n\n        <div class=\"row\">\n\n            \n\n            <div class=\"col-xs-12\">\n                            \n                \n                    <div class=\"float-end\">\n                        \n                    </div>\n                \n            \n                <h2>\n                    <a href=\"publication_modal/1146465\" title=\"Multi-omic surveillance of Escherichia coli and Klebsiella spp. in hospital sink drains and patients\" class=\"pat-plone-modal\" data-pat-plone-modal='{\"buttons\":\".formControls a\"}' itemprop=\"name\">Multi-omic surveillance of Escherichia coli and Klebsiella spp. in hospital sink drains and patients</a>\n                </h2>\n  \n                \n                    <p class=\"categories-list\">\n                        <a href=\"https://www.expmedndm.ox.ac.uk/publications/search?type=1\" title=\"Journal article\">\n                            <span class=\"badge bg-primary\">Journal article</span>\n                        </a>\n                    </p>\n                \n\n                \n                \n                        \n                    <p itemprop=\"description\">Constantinides B. et al, (2020)</p>\n                \n                        \n                \n                    <p>\n                        <div class=\"altmetric-embed\" data-badge-type=\"\" data-doi=\"10.1101/2020.02.19.952366\" data-link-target=\"_blank\"></div>\n                    </p>\n                \n                \n            </div>\n\n        </div>\n\n    </div>\n\n\n",
        "\n\n    <div class=\"listing-item listing-item-publication\" itemscope itemprop=\"itemListElement\" itemtype=\"http://schema.org/PublicationVolume\">\n\n        <div class=\"row\">\n\n            \n\n            <div class=\"col-xs-12\">\n                            \n                \n                    <div class=\"float-end\">\n                        \n                    </div>\n                \n            \n                <h2>\n                    <a href=\"publication_modal/1764065\" title=\"The role of CAPG in molecular communication between the embryo and the uterine endometrium: Is its function conserved in species with different implantation strategies?\" class=\"pat-plone-modal\" data-pat-plone-modal='{\"buttons\":\".formControls a\"}' itemprop=\"name\">The role of CAPG in molecular communication between the embryo and the uterine endometrium: Is its function conserved in species with different implantation strategies?</a>\n                </h2>\n  \n                \n                    <p class=\"categories-list\">\n                        <a href=\"https://www.expmedndm.ox.ac.uk/publications/search?type=7\" title=\"Preprint\">\n                            <span class=\"badge bg-primary\">Preprint</span>\n                        </a>\n                    </p>\n                \n\n                \n                \n                        \n                    <p itemprop=\"description\">Tinning H. et al, (2020)</p>\n                \n                        \n                \n                    <p>\n                        <div class=\"altmetric-embed\" data-badge-type=\"\" data-doi=\"10.1101/2020.02.19.953794\" data-link-target=\"_blank\"></div>\n                    </p>\n                \n                \n            </div>\n\n        </div>\n\n    </div>\n\n\n"
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