Typhi Mykrobe: fast and accurate lineage identification and antimicrobial resistance genotyping directly from sequence reads for the typhoid fever agent Salmonella Typhi

Ingle D., Hawkey J., Hunt M., Iqbal Z., Keane J., Afolayan A., Ahmed N., Andleeb S., Ashton P., Bogoch I., Carey M., Chattaway MA., Crump J., Guevara PD., Howden B., Izumiya H., Jacob JJ., Judd L., Kapil A., Keddy K., Kim J., Levine M., Morita M., Nair S., Octavia S., Okeke I., Osadebamwen P., Rahman SIA., Rokney A., Rasko D., Shamanna V., Sikorski M., Smith A., Sunmonu G., Tagg K., Wick R., Dyson Z., Holt K., Global Typhoid Genomics Consortium .

DOI

10.1101/2024.09.30.613582

Type

Preprint

Publication Date

2024-01-01T00:00:00+00:00

Keywords

Global Typhoid Genomics Consortium

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